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Cyclocarya Paliurus (Bata1) Iljinskaja
source:Chinese Herbal Plant Genome Database  time:2017-06-10 14:20:16

Year: 2016

InstitutionJiangxi Key Laboratory of Natural Products and  Functional Food; Jiangxi Agricultural University, Nanchang

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Material

Data

Assembly

Annotation

Sequencing platform

Data size (Gb)

Method

Contig N50 (bp)

Average length (bp)

Unigenes

Calluses were induced from the leaves collected between April and May,   then inoculated on fresh agar-based MS medium, Jiangxi Agricultural   University in July.

Illumina HiSeq 4000

39.0 and 49.4 million raw reads, respectively

Trinity

1,244

704

65,654

Nr, SwissPort, KEGG, GO and COG

Publication

Xu X, Yin Z, Chen J, et al. De Novo   Transcriptome Assembly and Annotation of the Leaves and Callus of Cyclocarya   Paliurus (Bata1) Iljinskaja[J]. PloS one, 2016, 11(8): e0160279.

Data link

GEUI00000000