Download
current location:homeDownload
Xanthium strumarium
source:Chinese Herbal Plant Genome Database  time:2017-06-10 14:46:13

Year: 2016

InstitutionDepartment of Medicinal Plant, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, P.R. China

Download:

Material

Data

Assembly

Annotation

Sequencing platform

Data size (Gb)

Method

Contig N50 (bp)

Average length (bp)

Unigenes

Young leaves. Wuhan Botanical Garden, Chinese Academy of Sciences

Illumina HiSeq 2000

Hubei-cultivar (HY), the young leaves of the Zunyi-cultivar (ZY), and   the glandular trichomes of the Hubei-cultivar (HT), resulting in clean reads   of 53,389,348 for HY, 52,073,570 for ZY, and 52,073,570 for HT

Trinity

1,238

793

91,861

Nr, KEGG,COG,GO

Publication

Li Y, Gou J, Chen F, et al. Comparative   Transcriptome Analysis Identifies Putative Genes Involved in the Biosynthesis   of Xanthanolides in Xanthium strumarium L[J]. Frontiers in Plant Science,   2016, 7.

Data link

https://www.ncbi.nlm.nih.gov/sra/?term= SRP056511