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Gardenia jasminoides
source:Chinese Herbal Plant Genome Database  time:2017-06-10 16:19:56

Year: 2016

Institution: Jiangxi Academy of Forestry, Nanchang, Jiangxi 330032, China

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Material

Data

Assembly

Annotation

Sequencing platform

Data size (Gb)

Method

Contig N50 (bp)

Average length (bp)

Unigenes

Fruit. Zhangshu City, Jiangxi Province, China.

Illumina HiSeq 2500

A total of 28,982,448 and 33,273,578 raw reads obtained in green fruit   (at 16 weeks after the flowering date) and

mature fruit.

Trinity

2,178

1,357

100,889

Nr, Swiss-Prot, KO and then COG.

Publication

Yang C, Zhang T, Xu M, et al. Insights into   biosynthetic genes involved in the secondary metabolism of Gardenia   jasminoides Ellis using transcriptome sequencing[J]. Biochemical Systematics   and Ecology, 2016, 67: 7-16.

Data link

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