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Huperzia serrata
source:Chinese Herbal Plant Genome Database  time:2017-06-10 16:52:23

Year: 2017

InstitutionCAS Key Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai

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Material

Data

Assembly

Annotation

Sequencing platform

Data size (Gb)

Method

Contig N50 (bp)

Average length (bp)

Unigenes

Root, stem, leaf, and sporangia samples. Xiangxi, Hunan, China.

Illumina HiSeq 4000

45

Trinity

2,488

812

830,623

NrSwiss-Prot,COG   and KEGG

Publication

Yang M, You W, Wu S, et al. Global   transcriptome analysis of Huperzia serrata and identification of critical   genes involved in the biosynthesis of huperzine A[J]. BMC genomics, 2017,   18(1): 245.

Data link

https://www.ncbi.nlm.nih.gov/bioproject/PRJCA000351/