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Camptotheca acuminata
source:Chinese Herbal Plant Genome Database  time:2018-01-29 20:24:56

Year2017

Institution

Department of Plant Biology, Michigan State University, 612 Wilson Rd., East Lansing, MI 48824, USA

Data link:

 

Genome size

Data

Assembly

Repeat

Sequencing platform

Data size (Gb)

Method

Contig N50

Scaffold N50

CEGMA evalutaion

403.2 Mb

Illumina HiSeq   2500 platform

-

ALLPATHS-LG v.   44837, GapCloser v. 1.12r6

108Kb

1.75Mb

93.6%

35.6%

Publication

Zhao D, Hamilton J P, Pham G M, et al. De novo genome assembly of   Camptotheca acuminata, a natural source of the anti-cancer compound   camptothecin[J]. GigaScience, 2017, 6(9): 1-7.

Data link

ftp://202.203.187.112:2222/genome/huanxishu/