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Calotropis gigantea
source:Chinese Herbal Plant Genome Database  time:2018-02-22 21:17:04

Year2017

Institution

Department of Plant Biology, Michigan State University, East Lansing, MI 48824 USA

 

Genome size

Data

Assembly

Repeat

Sequencing platform

Data size (x)

Method

Contig N50

Scaffold N50

BUSCO

evalutaion

157 Mb

Illumina

HiSeq 2500

193

Allpahts-LG, Platanus,   GapCloser, SOAPdenovo   

48.5kb

805.9kb

92.0%

-

Publication

Hoopes G M, Hamilton J P, Kim J, et al. Genome Assembly and Annotation   of the Medicinal Plant Calotropis gigantea, a Producer of Anticancer and   Antimalarial Cardenolides[J]. G3: Genes, Genomes, Genetics, 2018, 8(2):   385-391.

Data link

NCBI  BioProject PRJNA400797

http://medicinalplantgenomics.msu.edu/

ftp://202.203.187.112:2222/genome/Calotropis_gigantea/