Species: Alisma orientale
Sample Location: Jian'ou County, Nanping City, Fujian Province in July 2016.
Sample Part: roots, leaves, scapes and inflorescences
Sequencing platform: Illumina HiSeq 4000
Sequencing data: 372,971,128 clean reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 41,685 unigenes (lengths ranged from 199 bp to13,455 bp, the average length was 1,117 bp, the N50 length was 1,727 bp, the GC percentage was 47.39%, and the number of total assembled bases were 46,562,041)
Annotation Method: Nr, SwissProt, GO, KOG, KEGG
Lin W, Sun F, Zhang Y, et al. Comparative transcriptome and metabolite profiling of four tissues from Alisma orientale (Sam.) Juzep reveals its inflorescence developmental and medicinal characteristics[J]. Scientific reports, 2019, 9(1): 1-12.