Species: Alisma orientale

Accession Number



Sample Location: Jian'ou County, Nanping City, Fujian Province in July 2016.

Sample Part: roots, leaves, scapes and inflorescences


Sequencing platform: Illumina HiSeq 4000

Sequencing data: 372,971,128 clean reads

Assembly and Annotation

Assembly software: Trinity

Assembly result: 41,685 unigenes (lengths ranged from 199 bp to13,455 bp, the average length was 1,117 bp, the N50 length was 1,727 bp, the GC percentage was 47.39%, and the number of total assembled bases were 46,562,041)

Annotation Method: Nr, SwissProt, GO, KOG, KEGG


Lin W, Sun F, Zhang Y, et al. Comparative transcriptome and metabolite profiling of four tissues from Alisma orientale (Sam.) Juzep reveals its inflorescence developmental and medicinal characteristics[J]. Scientific reports, 2019, 9(1): 1-12.