Species: Alisma orientale

Accession Number

SRP124598

Sample

Sample Location: Jian’ou County, Nanping City, Fujian Province in July 2016

Sample Part: roots, leaves, scapes and inforescences

Sequencing

Sequencing platform: Illumina HiSeq 4000

Sequencing data: 91,962,600 clean reads for RT, 94,101,458 for LF, 90,311,938 for SC and 96,595,132 for IN

Assembly and Annotation

Assembly software: Trinity

Assembly result: 40,375 unigenes in RT, 39,231 unigenes in LF, 39,450 unigenes in SC, and 40,174 unigenes in IN, unigene lengths ranged from 199 bp to13,455 bp, the average length was 1,117 bp, the N50 length was 1,727 bp, the GC percentage was 47.39%.

Annotation Method: KOG, GO, KEGG, COG, NR

Reference

Lin W , Sun F , Zhang Y , et al. Comparative transcriptome and metabolite profiling of four tissues from Alisma orientale (Sam.) Juzep reveals its inflorescence developmental and medicinal characteristics[J]. Scientific Reports, 2019, 9(1).